Oh thats not how you've got them wired now?
Yep thats it.
Here's how i'll run mine;
1x fan on a 30A relay with some thick cable... Relay will connect to an adjustable switch. 1x will be set at 95-100'c so if it starts to climb in temps she'll kick in.
Then 2nd (on constantly low speed)
will go through a 30A relay, off a 12v ignition source. OR if i can find a soruce that only runs when the engine is on. i'll tap into that.
You cant directly run them from the battery as a long term solution your end up melting things...
A quick google imamge search.. something like this;